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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs11867039 chr16:67554340 T/G 6.13E-5 396 15.6 13.2 19.2 KM Plot
LGG rs11895434 chr2:86890560 G/A 0 403 15.83 13.23 6.38 KM Plot
LGG rs11900182 chr2:228096871 G/C 0 405 15.67 14.43 0.62 KM Plot
LGG rs11900753 chr2:202044716 G/A 1.77E-6 406 15.25 15.63 4.45 KM Plot
LGG rs11913215 chr22:42783130 G/T 7.33E-15 404 15.3 15.47 6.47 KM Plot
LGG rs11914785 chr3:153676298 T/A 0 405 15.15 16.77 0.23 KM Plot
LGG rs11915886 chr3:153677273 T/C 0 405 15.13 17.07 0.23 KM Plot
LGG rs11917491 chr3:153669848 A/G 0 407 15.17 16.47 0.23 KM Plot
LGG rs11922241 chr3:167077840 A/C 4.48E-7 407 15.35 15.52 7.13 KM Plot
LGG rs11924403 chr3:153669615 C/G 0 407 15.17 16.47 0.23 KM Plot
LGG rs11924531 chr3:153669781 C/T 0 407 15.17 16.77 0.23 KM Plot
LGG rs11924564 chr3:153664075 C/T 0 406 15.17 16.77 0.23 KM Plot
LGG rs11926043 chr3:153675972 C/T 0 405 15.15 16.77 0.23 KM Plot
LGG rs11926192 chr3:153676303 G/A 0 405 15.13 17.07 0.23 KM Plot
LGG rs11951246 chr5:155987523 C/T 2.78E-6 407 15.7 15.17 15.23 KM Plot